function to run a binary analysis using a method specified by the method argument — phewas_analysis • ms

function to run a binary analysis using a method specified by the method argument

Usage

phewas_analysis(
  data = NULL,
  design = NULL,
  outcome,
  exposure,
  covariates,
  method,
  logistf_pl = FALSE,
  .weight_var = NULL,
  verbose = TRUE,
  show_error = FALSE
)

Arguments

data: data frame
design: survey design object
outcome: name of outcome variable
exposure: name of exposure variable
covariates: vector of covariate names
method: method to use for analysis
logistf_pl: whether to use profile likelihood in logistf
.weight_var: name of weight variable
verbose: whether to print offending exposure
show_error: whether to show error messages

Value

list of results from model for the exposure