PheWAS catalog information
pheinfo.RdA table listing PheWAS Codes (or phecodes) and their corresponding description, category, exclusion range, and other information. Last manually curated on June 1, 2023.
Format
## `pheinfo` A data frame with 1,866 rows and 12 columns:
- phecode
PheWAS Code (aka phecode)
- description
Phecode description
- group
Phecode disease category or group
- order
A variable ordering by `groupnum` and then numeric `phecode` value, useful for plotting
- color
Phecode group color inspired by Okabe-Ito colorblind-friendly palette
- sex
Defines `male` or `female` specific phecodes, otherwise `both`
- rollup
Indicator for whether `phecode` rolls up
- leaf
Indicator for whether `phecode` is a leaf (a subcode of a parent code)
- groupnum
A numeric value corresponding to `phecode` `group`
- color_original
Original `phecode` `group` color scheme
- phecode_exclude_range
Range of phecodes that disqualify as controls for a given `phecode`
- phecode_exclude_phenotypes
Description of `phecode_exclude_range` codes
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